Journal Articles
- Transcriptomic profiling of retinal cells reveals a subpopulation of microglia/macrophages expressing Rbpms marker of retinal ganglion cells (RGCs) that confound identification of RGCs. *Corresponding author.
Theune, W.C.; Frost, M.P.; and Trakhtenberg, E.F*. Brain Research, 2023; 148377 - The people behind the papers – Jian Xing, Agnieszka Lukomska, Bruce Rheaume and Ephraim Trakhtenberg.
The Company of Biologists. Development, 2023; 150 (8): dev201870 - Experimental gene expression of developmentally downregulated Crmp1, Crmp4, and Crmp5 promotes axon regeneration and retinal ganglion cell survival after optic nerve injury. *Corresponding author.
Lukomska, A.; Theune, W.C.; Xing, J.; Frost, M.P.; Damania, A.; Gupta, M.; and Trakhtenberg, E.F*. Brain Research, 2023; 1809: 148368 - Pten inhibition dedifferentiates long-distance axon-regenerating intrinsically photosensitive retinal ganglion cells and upregulates mitochondria-associated Dynlt1a and Lars2. *Corresponding author.
Rheaume, B.A.; Xing, J.; Lukomska, A.; Theune, W.C.; Damania, A.; Sjogren, G.; and Trakhtenberg, E.F*. Development, 2023; 150 (8): dev.201644 - Post-injury born oligodendrocytes incorporate into the glial scar and contribute to the inhibition of axon regeneration. *Corresponding author.
Xing, J.; Lukomska, A.; Rheaume, B.A.; Kim, J.; Sajid, M.S.; Damania, A.; and Trakhtenberg, E.F*. Development, 2023; 150 (8): dev.201311 - Retroactive analysis of single cell transcriptome profiles using next-generation algorithms revised the identification of several resilient retinal ganglion cell types. *Corresponding author.
Rheaume, Bruce A; and Trakhtenberg, Ephraim F*. bioRxiv 2021.10.15.464552 - Developmentally upregulated Transcriptional Elongation Factor A like 3 suppresses axon regeneration after optic nerve injury. *Corresponding author.
Lukomska, A.; Kim, J.; Rheaume, B.A.; Xing, J.; Hoyt, A.; Lecky, E.; Damania, A.; Steidl, T.; and Trakhtenberg, E.F*. Neuroscience Letters, 2021 Nov;765(20):136260 - Corneal nonmyelinating Schwann cells illuminated by single-cell transcriptomics and visualized by protein biomarkers.
Bargagna-Mohan, P., Schultz, G., Rheaume, B.A., Trakhtenberg, E.F., Robson, P., Pal-Ghosh, S., Stepp, M.A., Given, K.S., Macklin, W.B., and Mohan, R. J Neurosci Res, 2020 99(3):731-749 - Single cell transcriptome profiling of retinal ganglion cells identifies cellular subtypes. *Corresponding author.
Rheaume, Bruce A; Jereen, Amyeo; Bolisetty, Mohan; Sajid, Muhammad S; Yang, Yue; Renna, Kathleen; Sun, Lili; Robson, Paul; and Trakhtenberg, Ephraim F*. Nature Communications, 2018 Jun; 9(2759) - The extent of extra-axonal tissue damage determines the levels of CSPG upregulation and the success of experimental axon regeneration in the CNS. *Corresponding author.
Kim, Juhwan; Sajid, Muhammad S; and Trakhtenberg, Ephraim F*. Scientific Reports, 2018 Jun;8(1):9839 - Zinc chelation and Klf9 knockdown cooperatively promote axon regeneration after optic nerve injury. *Corresponding author.
Trakhtenberg, Ephraim F*; Li, Yiqing; Feng, Qian; Janice, Tso; Rosenberg, Paul A; Goldberg, Jeffrey L; and Benowitz, Larry I. Experimental Neurology, 2017 Oct;300:22-29 - Cell types differ in global coordination of splicing and proportion of highly expressed genes. *Corresponding author.
Trakhtenberg, Ephraim F*; Pho, Nam; Holton, Kristina M; Chittenden, Thomas W; Goldberg, Jeffrey L; and Dong, Lingsheng. Scientific Reports, 2016 Aug;6:32249 - Serotonin receptor 2C regulates neurite growth and is necessary for normal retinal processing of visual information. *Co-corresponding author.
Trakhtenberg, Ephraim F*; Pita-Thomas, Wolfgang; Fernandez, Stephanie G; Patel, Karan H; Venugopalan, Praseeda; Shechter, Jesse M; Morkin, Melina I; Galvao, Joana; Liu, Xiongfei; Dombrowski, Susan M; and Goldberg, Jeffrey L*. Developmental Neurobiology, 2016 Apr;77(4):419-437 - The N-terminal Set-β Protein Isoform Induces Neuronal Death. *Co-corresponding author.
Trakhtenberg, Ephraim F*; Morkin, Melina I; Patel, Karan H; Fernandez, Stephanie G; Sang, Alan; Shaw, Peter; Liu, Xiongfei; Wang, Yan; Mlacker, Gregory M; Gao, Han; Velmeshev, Dmitry; Dombrowski, Susan M; Vitek, Michael P; and Goldberg, Jeffrey L*. The Journal of Biological Chemistry, 2015 May;290(21):13417-26 - Inflammation and Optic Nerve Regeneration
Andereggen, L., Trakhtenberg, E. F., Yuqin, Y., and Benowitz, L. I. Neuroinflammation: New Insights into Beneficial and Detrimental Functions, 2015 May;189-204 - Regulation of intrinsic axon growth ability at retinal ganglion cell growth cones.
Steketee, Michael B; Oboudiyat, Carly; Daneman, Richard; Trakhtenberg, Ephraim F; Lamoureux, Philip; Weinstein, Jessica E; Heidemann, Steve; Barres, Ben A; and Goldberg, Jeffrey L. Investigative Ophthalmology & Visual Science, 2014 Jul;55(7):4369-77 - Regulating Set-β's Subcellular Localization Toggles Its Function between Inhibiting and Promoting Axon Growth and Regeneration. *Co-corresponding author.
Trakhtenberg, Ephraim F*; Wang, Yan; Morkin, Melina I; Fernandez, Stephanie G; Mlacker, Gregory M; Shechter, Jesse M; Liu, Xiongfei; Patel, Karan H; Lapins, Allison; Yang, Steven; Dombrowski, Susan M; and Goldberg, Jeffrey L*. The Journal of Neuroscience, 2014 May;34(21):7361-74 - Soluble adenylyl cyclase activity is necessary for retinal ganglion cell survival and axon growth.
Corredor, Raul G; Trakhtenberg, Ephraim F; Pita-Thomas, Wolfgang; Jin, Xiaolu; Hu, Ying; and Goldberg, Jeffrey L. The Journal of Neuroscience, 2012 May;32(22):7734-44 - Epigenetic regulation of axon and dendrite growth. *Co-corresponding author.
Trakhtenberg, Ephraim F*; Goldberg, Jeffrey L*. Frontiers in Molecular Neuroscience, 2012 Jan;524 - The role of serotonin in axon and dendrite growth. *Co-corresponding author.
Trakhtenberg, Ephraim F*; Goldberg, Jeffrey L*. International Review of Neurobiology, 2012 Jan;106105-26 - β1 integrin-focal adhesion kinase (FAK) signaling modulates retinal ganglion cell (RGC) survival.
Santos, Andrea Rachelle C; Corredor, Raul G; Obeso, Betty Albo; Trakhtenberg, Ephraim F; Wang, Ying; Ponmattam, Jamie; Dvoriantchikova, Galina; Ivanov, Dmitry; Shestopalov, Valery I; Goldberg, Jeffrey L; Fini, Mary Elizabeth; and Bajenaru, Michaela Livia. PloS One, 2012 Jan;7(10):e48332 - Neuroimmune communication.
Trakhtenberg, Ephraim F; Goldberg, Jeffrey L. Science, 2011 Oct;334(6052):47-8 - The effects of guided imagery on the immune system: a critical review. *Corresponding author.
Trakhtenberg, Ephraim F*. The International Journal of Neuroscience, 2008 Jun;118(6):839-55
Books
- Axon Growth and Regeneration: Part I. Preface.
Goldberg, Jeffrey L; Trakhtenberg, Ephraim F. (Editors. 2012). International Review of Neurobiology, 2012 Jan;105 - Axon Growth and Regeneration: Part II. Preface.
Goldberg, Jeffrey L; Trakhtenberg, Ephraim F. (Editors. 2012). International Review of Neurobiology, 2012 Jan;106