| January 24, 2019 |
UConn Health |
Introduction to Bioinformatics and Computational Molecular Biology |
Simon |
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Basics |
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Problems and Solutions |
Simon |
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| January 31, 2019 |
UConn Health |
Simulated Annealing |
Simon |
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Graphs, Hashing, Strings |
Simon |
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Sequence, Primary Structure |
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| February 7, 2019 |
UConn Health |
Cloning, DNA Amplification |
Gunzl |
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Short Reads, Fragment Assembly |
Simon |
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| February 14, 2019 |
UConn Health |
Alignment |
Simon |
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BLAST |
Simon |
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| February 21, 2019 |
UConn Health |
BLAST Cont., FAST A |
Simon |
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| February 28, 2019 |
UConn Health |
NMR |
Maciejewski |
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Normal Mode Analysis |
Schuyler |
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| March 7, 2019 |
UConn Health |
Joint Probability, Conditional Probability, Markov Assumption, Entropy |
Simon |
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Expectation-Maximization |
Simon |
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Hidden Markov Models for Gene-finding |
Simon |
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| March 14, 2019 |
UConn Health |
Expectation Maximization, Motif Elicitation |
Simon |
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Fourier Transformation
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Simon |
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| March 21, 2019 |
No Class |
Spring Break (March 17 - 23) |
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| March 28, 2019 |
UConn Health |
Brief Intro to Linear Algebra, Molecular Evolution, Stationarity |
Simon |
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| April 4, 2019 |
UConn Health |
Molecular Divergence |
Simon |
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Phylogeny |
Simon |
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Secondary and Tertiary Structure |
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| April 11, 2019 |
UConn Health |
Clustering |
Simon |
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Principal Component Analysis |
Simon |
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| April 18, 2019 |
UConn Health |
DALI |
Maciejewski |
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X-Ray Crystallography |
Hao |
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| April 25, 2019 |
UConn Health |
TBA |
TBA |
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| May 2, 2019 |
UConn Health |
Student Project Presentation |
All |
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