{"id":30,"date":"2017-11-09T09:35:59","date_gmt":"2017-11-09T14:35:59","guid":{"rendered":"https:\/\/health.uconn.edu\/connjur\/?page_id=30"},"modified":"2018-01-25T16:03:15","modified_gmt":"2018-01-25T21:03:15","slug":"spectrum-translator","status":"publish","type":"page","link":"https:\/\/health.uconn.edu\/connjur\/projects\/spectrum-translator\/","title":{"rendered":"Spectrum Translator"},"content":{"rendered":"

CONNJUR_ST is a free, extensible, and open source application for NMR File Spectral Format Conversion, which is available as a cross-platform executable application.<\/p>\n

Quickstart Guide<\/a><\/p>\n

Benefits of the Spectrum Translator<\/h3>\n
    \n
  1. Uniform syntax<\/b>\u00a0for all conversions.<\/li>\n
  2. Supports\u00a0generic source<\/b>\u00a0file format.<\/li>\n
  3. Dimension ordering<\/b>\u00a0can be directly specified.<\/li>\n
  4. Optional\u00a0logging<\/b>\u00a0of each FID read\/write event.<\/li>\n
  5. Supports\u00a0ASCII<\/b>\u00a0data exportation.<\/li>\n
  6. ALL binary conversions can be reversed (i.e. conversions are\u00a0bidirectional<\/b>).<\/li>\n
  7. Comprehensive use of\u00a0Meta Data\u00a0<\/b>minimizes (often eliminates) need for configuration.<\/li>\n
  8. Easily\u00a0Configurable<\/b>\u00a0via XML or command line options.<\/li>\n
  9. Can easily be run in\u00a0batch\u00a0<\/b>mode.<\/li>\n
  10. Cross platform\u00a0<\/b>(runs on Windows, *NIX, OS-X).<\/li>\n
  11. Active and direct developer\u00a0support<\/b>\u00a0available.<\/li>\n
  12. Tested<\/b>\u00a0daily against ALL supported file formats.<\/li>\n
  13. Open source<\/b><\/li>\n
  14. Can be embedded as a\u00a0library<\/b><\/li>\n
  15. Supports a\u00a0file<\/b>\u00a0streaming API<\/b>\u00a0as well as file-to-file based conversion.<\/li>\n
  16. Easily extensible\u00a0<\/b>- Extension only requires identifying metadata and file layout; does not requiring writing code to\u00a0tranverse fid data portion of file(s).<\/span><\/li>\n
  17. Supports semantic conversions; additional\u00a0conversions can be added<\/b>\u00a0with about 150 lines of code in a single file.<\/li>\n
  18. Reasonable\u00a0performance<\/b>\u00a0and response time.<\/li>\n
  19. Support for frequency data.<\/li>\n<\/ol>\n<\/div><\/div><\/div>
    \"C-ST\"<\/div><\/div><\/div>

    Screenshots\u00a0<\/h3>\n

    \"st<\/a>\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0\"st<\/a><\/p>\n

    \u00a0<\/p>\n

    References\u00a0<\/h3>\n

    Ellis, H.J.C., Weatherby, G., Nowling, R.J., Vyas, J., Fenwick, M. & Gryk, M.R. (2013). A Pipeline Software Architecture for NMR Spectrum Data Translation.\u00a0Computing in Science and Engineering<\/cite>,\u00a015<\/b>, 76-83. PMCID: NIHMS418891.<\/p>\n

    Nowling, R.J., Vyas, J., Weatherby, G.,Fenwick, M., Ellis, H.J.C. & Gryk, M.R. (2011).\u00a0CONNJUR spectrum translator: an open source application for reformatting NMR spectral data.<\/a>\u00a0J Biomol NMR<\/cite>,\u00a050<\/b>, 83-89. PMCID:\u00a0PMC3085058<\/a><\/p>\n

    \u00a0<\/p>\n<\/div><\/div><\/div><\/div><\/div>","protected":false},"excerpt":{"rendered":"

    CONNJUR_ST is a free, extensible, and open source application for NMR File Spectral Format Conversion, which is available as a cross-platform executable application.Quickstart GuideBenefits of the Spectrum TranslatorUniform syntax\u00a0for all conversions.Supports\u00a0generic source\u00a0file format.Dimension ordering\u00a0can be directly specified.Optional\u00a0logging\u00a0of each FID read\/write event.Supports\u00a0ASCII\u00a0data exportation.ALL binary conversions can be reversed (i.e. conversions are\u00a0bidirectional).Comprehensive use of\u00a0Meta Data\u00a0minimizes (often eliminates) […]<\/p>\n","protected":false},"author":38,"featured_media":0,"parent":582,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_acf_changed":false,"footnotes":""},"acf":[],"publishpress_future_action":{"enabled":false,"date":"2026-05-09 18:38:01","action":"change-status","newStatus":"draft","terms":[],"taxonomy":""},"_links":{"self":[{"href":"https:\/\/health.uconn.edu\/connjur\/wp-json\/wp\/v2\/pages\/30"}],"collection":[{"href":"https:\/\/health.uconn.edu\/connjur\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/health.uconn.edu\/connjur\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/health.uconn.edu\/connjur\/wp-json\/wp\/v2\/users\/38"}],"replies":[{"embeddable":true,"href":"https:\/\/health.uconn.edu\/connjur\/wp-json\/wp\/v2\/comments?post=30"}],"version-history":[{"count":27,"href":"https:\/\/health.uconn.edu\/connjur\/wp-json\/wp\/v2\/pages\/30\/revisions"}],"predecessor-version":[{"id":590,"href":"https:\/\/health.uconn.edu\/connjur\/wp-json\/wp\/v2\/pages\/30\/revisions\/590"}],"up":[{"embeddable":true,"href":"https:\/\/health.uconn.edu\/connjur\/wp-json\/wp\/v2\/pages\/582"}],"wp:attachment":[{"href":"https:\/\/health.uconn.edu\/connjur\/wp-json\/wp\/v2\/media?parent=30"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}