{"id":203,"date":"2017-11-09T12:36:32","date_gmt":"2017-11-09T17:36:32","guid":{"rendered":"https:\/\/health.uconn.edu\/connjur\/?page_id=203"},"modified":"2018-02-01T11:05:52","modified_gmt":"2018-02-01T16:05:52","slug":"publications","status":"publish","type":"page","link":"https:\/\/health.uconn.edu\/connjur\/about\/publications\/","title":{"rendered":"Publications"},"content":{"rendered":"

Fenwick, M., Hoch, J.C., Ulrich, E., Gryk, M.R. (2015). CONNJUR R: an annotation strategy for fostering reproducibility in bio-NMR-protein spectral assignment. J Biomol NMR.<\/cite> 63<\/strong>, 141-50.<\/p>\n

Fenwick, M., Ellis, H.J.C., & Gryk, M.R. (2013). Parser Combinators: a Practical Application for Generating Parsers for NMR Data.\u00a02013 10th International Conference on Information Technology: New Generations<\/cite>, Las Vegas, NV, 2013, pp. 241-246.<\/p>\n

Ellis, H.J.C., Weatherby, G., Nowling, R.J., Vyas, J., Fenwick, M. & Gryk, M.R. (2013). A Pipeline Software Architecture for NMR Spectrum Data Translation.\u00a0Computing in Science and Engineering<\/cite>,\u00a015<\/b>, 76-83. PMCID: NIHMS418891.<\/p>\n

Vyas, J. (2012). Data Mart Integration of the Proteome. Doctoral Dissertation for a Ph.D. in Biomedical Science, University of Connecticut Health Center, Farmington, CT<\/p>\n

Fenwick, M., Sesanker, C., Schiller, M.R., Ellis, H.J.C., Hinman, L., Vyas, J., & Gryk, M.R. (2012). An Open-Source Sandbox for Increasing the Accessibility of Functional Programming to the Bioinformatics and Scientific Communities.\u00a0Proc Int Conf Inf Technol New Gener. 2012<\/cite>\u00a012<\/b>, 89-94. PMCID: NIHMS355544.<\/p>\n

Nowling, R.J., Vyas, J., Weatherby, G., Fenwick, M.W., Ellis, H.J.C, & Gryk, M.R. (2011). CONNJUR spectrum translator: an open source application for reformatting NMR spectral data.\u00a0Journal of Biomolecular NMR<\/cite>,\u00a050<\/b>, 1, 83-89. PMCID: PMC3085058.<\/p>\n

Ellis H.J., Nowling R.J., Vyas J., Martyn, T.O. & Gryk, M.R. (2011). Iterative Development of an Application to Support Nuclear Magnetic Resonance Data Analysis of Proteins.\u00a0Proc Int Conf Inf Technol New Gener. 2011<\/cite>,\u00a011<\/b>, 1014-1020. PMCID: PMC3244275.<\/p>\n

Gryk, M.R., Vyas, J., & Maciejewski, M.W. (2010). Biomolecular NMR data analysis.\u00a0Prog. Nucl. Magn. Reson. Spectrosc.<\/cite>,\u00a056<\/b>, 329-45. PMCID: PMC2899495.<\/p>\n

Vyas, J., Gryk, M.R., & Schiller, M.R. (2009). VENN, a tool for titrating sequence conservation onto protein structures.\u00a0Nucleic Acids Res.<\/cite>,\u00a037<\/b>, e124. PMCID: PMC2764419.<\/p>\n

Fox-Erlich S., Schiller M.R., Gryk M.R. (2009). Structural Conservation of a short, functional, peptide sequence motif.\u00a0Front. Biosci.<\/cite>,\u00a014<\/b>, 1143-1151. PMCID: PMC2654600.<\/p>\n

Mobli M., Maciejewski M.W., Gryk M.R. & Hoch J.C. (2007). An automated tool for maximum entropy reconstruction of biomolecular NMR spectra.\u00a0Nat. Methods<\/cite>,\u00a04<\/b>, 467-8.<\/p>\n

Mobli M., Maciejewski M.W., Gryk M.R. & Hoch J.C. (2007). Automatic maximum entropy spectral reconstruction in NMR.\u00a0J Biomol NMR.<\/cite>,\u00a039<\/b>, 133-9.<\/p>\n

Verdi, K.K., Ellis, H.J. & Gryk, M.R. (2007). Conceptual-level workflow modeling of scientific experiments using NMR as a case study.\u00a0BMC Bioinformatics<\/cite>,\u00a08<\/b>, 31. PMCID: PMC1796901.<\/p>\n

Ellis, H.J.C., Sinnott, B.D., Fox-Erlich, S., & Gryk, M.R. (2006). Undergraduate Research in Bioinformatics - The CONNJUR project, The 2006 Frontiers in Education Conference, San Diego, CA, Oct. 2006.<\/p>\n

Ellis, H.J.C., Fox-Erlich, S., Martyn, T.O., & Gryk, M.R. (2006). Development of an Integrated Framework for Protein Structure Determinations: A Logical Data Model for NMR Data Analysis.\u00a0Third International Conference on Information Technology: New Generations<\/cite>,\u00a06<\/b>, 613-618.<\/p>\n

Fox-Erlich, S., Martyn, T.O., Ellis, H.J.C, & Gryk, M.R. (2004). Delineation and Analysis of the Conceptual Data Model Implied by the \u00e2\u20ac\u02dcIUPAC Recommendations for Biochemical Nomenclature\u00e2\u20ac\u2122,\u00a0Prot. Science<\/cite>,\u00a013<\/b>, 2559-2558. PMCID: PMC2280010<\/p>\n<\/div><\/div><\/div><\/div><\/div>","protected":false},"excerpt":{"rendered":"

Fenwick, M., Hoch, J.C., Ulrich, E., Gryk, M.R. (2015). CONNJUR R: an annotation strategy for fostering reproducibility in bio-NMR-protein spectral assignment. J Biomol NMR. 63, 141-50.Fenwick, M., Ellis, H.J.C., & Gryk, M.R. (2013). Parser Combinators: a Practical Application for Generating Parsers for NMR Data.\u00a02013 10th International Conference on Information Technology: New Generations, Las Vegas, NV, […]<\/p>\n","protected":false},"author":38,"featured_media":0,"parent":597,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_acf_changed":false,"footnotes":""},"acf":[],"publishpress_future_action":{"enabled":false,"date":"2026-05-09 18:52:43","action":"change-status","newStatus":"draft","terms":[],"taxonomy":""},"_links":{"self":[{"href":"https:\/\/health.uconn.edu\/connjur\/wp-json\/wp\/v2\/pages\/203"}],"collection":[{"href":"https:\/\/health.uconn.edu\/connjur\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/health.uconn.edu\/connjur\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/health.uconn.edu\/connjur\/wp-json\/wp\/v2\/users\/38"}],"replies":[{"embeddable":true,"href":"https:\/\/health.uconn.edu\/connjur\/wp-json\/wp\/v2\/comments?post=203"}],"version-history":[{"count":10,"href":"https:\/\/health.uconn.edu\/connjur\/wp-json\/wp\/v2\/pages\/203\/revisions"}],"predecessor-version":[{"id":635,"href":"https:\/\/health.uconn.edu\/connjur\/wp-json\/wp\/v2\/pages\/203\/revisions\/635"}],"up":[{"embeddable":true,"href":"https:\/\/health.uconn.edu\/connjur\/wp-json\/wp\/v2\/pages\/597"}],"wp:attachment":[{"href":"https:\/\/health.uconn.edu\/connjur\/wp-json\/wp\/v2\/media?parent=203"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}