{"id":3372,"date":"2022-02-08T10:35:08","date_gmt":"2022-02-08T15:35:08","guid":{"rendered":"https:\/\/health.uconn.edu\/cell-analysis-modeling\/?p=3372"},"modified":"2022-02-08T10:35:08","modified_gmt":"2022-02-08T15:35:08","slug":"publication-for-the-yu-lab","status":"publish","type":"post","link":"https:\/\/health.uconn.edu\/cell-analysis-modeling\/2022\/02\/08\/publication-for-the-yu-lab\/","title":{"rendered":"Publication for the Yu lab"},"content":{"rendered":"<p>12-11-21. Congratulations to Drs. Ji Yu and Ud Din who recently published a paper in Scientific Reports. The paper, &#8220;<a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/34907213\/\" target=\"_blank\" rel=\"noopener\"><span>Training a deep learning model for single\u2011cell segmentation without manual annotation<\/span><\/a>&#8221; presents a convolutional neural network (CNN) segmentation method that uses a marker-controlled segmentation algorithm that is suitable for use where cells are tightly packed together. (<a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/34907213\" target=\"_blank\" rel=\"noopener\">Training a deep learning model for single-cell segmentation without manual annotation. <\/a><span id=\"publication-authors\">Din, Nizam Ud; Yu, Ji<\/span><span>\u00a0<\/span><span id=\"publication-journal\">Scientific reports<\/span><span>\u00a0<\/span><span id=\"publication-year\">2021 Dec;<\/span><span id=\"publication-volume\">11<\/span><span id=\"publication-issue\">(1):<\/span><span id=\"publication-pages\">23995.)<\/span><\/p>\n<p><img loading=\"lazy\" decoding=\"async\" src=\"https:\/\/health.uconn.edu\/cell-analysis-modeling\/wp-content\/uploads\/sites\/149\/2022\/02\/Din-Yu-Publication-2021.png\" alt=\"Din and  Yu Publication 2021\" width=\"439\" height=\"286\" class=\"wp-image-3377 aligncenter\" \/><\/p>\n<p>Single-cell segmentation of bright-field (left) and fluorescence (middle) microscopy images using a neural-network model trained in a self-supervised fashion. Image on the right shows the consistency of the two segmentation results.<\/p>\n<p>&nbsp;<\/p>\n","protected":false},"excerpt":{"rendered":"<p>12-11-21. Congratulations to Drs. Ji Yu and Ud Din who recently published a paper in Scientific Reports. The paper, &#8220;Training a deep learning model for single\u2011cell segmentation without manual annotation&#8221; presents a convolutional neural network (CNN) segmentation method that uses a marker-controlled segmentation algorithm that is suitable for use where cells are tightly packed together. [&hellip;]<\/p>\n","protected":false},"author":283,"featured_media":0,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"_acf_changed":false,"wds_primary_category":0,"footnotes":""},"categories":[1],"tags":[],"acf":[],"publishpress_future_action":{"enabled":false,"date":"2026-04-12 15:27:57","action":"change-status","newStatus":"draft","terms":[],"taxonomy":"category"},"_links":{"self":[{"href":"https:\/\/health.uconn.edu\/cell-analysis-modeling\/wp-json\/wp\/v2\/posts\/3372"}],"collection":[{"href":"https:\/\/health.uconn.edu\/cell-analysis-modeling\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/health.uconn.edu\/cell-analysis-modeling\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/health.uconn.edu\/cell-analysis-modeling\/wp-json\/wp\/v2\/users\/283"}],"replies":[{"embeddable":true,"href":"https:\/\/health.uconn.edu\/cell-analysis-modeling\/wp-json\/wp\/v2\/comments?post=3372"}],"version-history":[{"count":3,"href":"https:\/\/health.uconn.edu\/cell-analysis-modeling\/wp-json\/wp\/v2\/posts\/3372\/revisions"}],"predecessor-version":[{"id":3378,"href":"https:\/\/health.uconn.edu\/cell-analysis-modeling\/wp-json\/wp\/v2\/posts\/3372\/revisions\/3378"}],"wp:attachment":[{"href":"https:\/\/health.uconn.edu\/cell-analysis-modeling\/wp-json\/wp\/v2\/media?parent=3372"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/health.uconn.edu\/cell-analysis-modeling\/wp-json\/wp\/v2\/categories?post=3372"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/health.uconn.edu\/cell-analysis-modeling\/wp-json\/wp\/v2\/tags?post=3372"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}